BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H07LP1|AL430306
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig919 1101 0.0
>3x_Contig919
Length = 4576
Score = 1101 bits (555), Expect = 0.0
Identities = 558/559 (99%)
Strand = Plus / Plus
Query: 381 tatatatattgatgtatctaaatagcggttttacagatctttttttctttaaaggacgaa 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 tatatatattgatgtatctaaatagcggttttacagatctttttttctttaaaggacgaa 1153
Query: 441 aatctcaggtttagtatcattacccaaagaagtcatgaaaatacctgaatgaggtttacg 500
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1154 aatctcaggtttagtatcattacccaaagaagtaatgaaaatacctgaatgaggtttacg 1213
Query: 501 tgaatttaagaataagctggacccaaaagacagacaaatgacgctttgaagggcccaaat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 tgaatttaagaataagctggacccaaaagacagacaaatgacgctttgaagggcccaaat 1273
Query: 561 atacagttgtgggataaatcatgagacgaggtctcactcggtttcttggtcgtaatccag 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 atacagttgtgggataaatcatgagacgaggtctcactcggtttcttggtcgtaatccag 1333
Query: 621 cctgatgtgtgttatccctgctcaacacagaaacaatgacatgggtgagtaccgtccagt 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 cctgatgtgtgttatccctgctcaacacagaaacaatgacatgggtgagtaccgtccagt 1393
Query: 681 ccatttaagaacagtaaaggtacattaatatgtacgtgtgtatgtatgtatgtatgtatg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 ccatttaagaacagtaaaggtacattaatatgtacgtgtgtatgtatgtatgtatgtatg 1453
Query: 741 ttcgtttgtatacatatattgaatagtagaggcgtatactgtttctcattcgggttactg 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 ttcgtttgtatacatatattgaatagtagaggcgtatactgtttctcattcgggttactg 1513
Query: 801 tgtagcggtaatgctatgcgaggaagccttatgcattgtcttcatcatagaataccggat 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 tgtagcggtaatgctatgcgaggaagccttatgcattgtcttcatcatagaataccggat 1573
Query: 861 cctgggtagctcccaaaatattagcagcgtatacgaaagtattatgatgcaactgttcta 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 cctgggtagctcccaaaatattagcagcgtatacgaaagtattatgatgcaactgttcta 1633
Query: 921 agtacctagtcataacatc 939
|||||||||||||||||||
Sbjct: 1634 agtacctagtcataacatc 1652
Score = 526 bits (265), Expect = e-149
Identities = 286/291 (98%), Gaps = 2/291 (0%)
Strand = Plus / Plus
Query: 1 gatctcaaacaagagacagaggagaaawtatgcgt-ggagaaagcaaaaaaaaacagcac 59
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 712 gatctcaaacaagagacagaggagaaaatatgcgtaggagaaagcaaaaaaaaacagcac 771
Query: 60 caatataataaaaa-caaaggactcaattgaaccagaatctatcaagcaagaagcaaaga 118
|||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 772 caatataataaaaaacaaaggactcaattgaaccagaagctagcaagcaagaagcaaaga 831
Query: 119 aaagttatcactttctttggaatcaattaaacttgaattattaaaaagagaattcaaatg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 aaagttatcactttctttggaatcaattaaacttgaattattaaaaagagaattcaaatg 891
Query: 179 aattggaagcagcggaaggcagataaagatggattatgcaaaagaaaatttcctgatcac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 aattggaagcagcggaaggcagataaagatggattatgcaaaagaaaatttcctgatcac 951
Query: 239 tctaccagaccaaaatatcaaaacagcagaatatctagaaaaaaggtgagc 289
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 tctaccagaccaaaatatcaaaacagcagaatatctagaaaaaaggtgagc 1002
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9001
Number of Sequences: 1807
Number of extensions: 9001
Number of successful extensions: 109
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)